Typically, PV water pumping (PVWP) systems for irrigation are normally designed based on the worst conditions, such as high water demand and low solar irradiation. Therefore, the installed PVWP systems become oversized in most of time. Since the conventional control systems don't optimize the water supply, the water losses are increased. To remedy the problems related to the operation of the oversized systems, a novel control system is proposed. The control unit interacts between water demand and water supply in order to pump only the amount required by crops. Moreover, the novel control system substitutes the conventional protection approach with a method based on the ground water resources availability and response. The novel control system represents an innovative solution for water savings in PV watering applications.